Links

(Really really really disorganised bookmarks (really disorganised) - July 2004)

3D, Raytracing & Rendering

KPovModeler
Ayam - Download
POV-Ray
Toy Story by Sun & Pixar
The Web3D Repository

Aesthetics

aesthetics + computation group mit media laboratory
Benjamin Fry website
Evolutionary Swarm Art
Electric Sheep
The Art of Writing Scientific Reports
Orwell Politics and the English Language
Word for the Wise

Bio software

Bioconductor
dBlast
BugView Genome Browser
BioExchange - Life Sciences and Biotechnology Resource for e-business services, career and employement services, e-commerce sol
Artemis - DNA seq viewer & annotation
Genome Atlas
PSORT-B Submit a Sequence
TargetP Server v1.01
SignalP server
The Sequence Manipulation Suite 2 (SMS2)
tacg - a 'grep' for DNA
DNA Strider + Mac Bio software
VigyaanCD.org
Seqhound
Biomolecule Naming Service (OpenBNS)

Biology

Protein Structure and Function Lectures
CELLS alive!
What the Heck Is...
The Human Genome
Bio-Mirror @ www.bio-mirror.net
Biology 166, Fall 2002 - unsolved probs in cell bio
A Gallery of Sequence Logos
The BioInformer -- Current issue
SBML.org - The home site for the Systems Biology Markup Language
Bio.com -- Biotechnology and Pharmaceutical Industry Analysis, Reports, and Jobs
NCBI Bookshelf
Algorithms in Molecular Biology - Ron Shamir
SCOL The Structural Classification of Ligands

Biotech

A Cartoon Guide to Genetics
Biotech @ 25 The Founders
Bioscience History - Bancroft Library
VSNS Biocomputing Division
Biotech Chronicles
2. Biotechnology Generation, diffusion, and policy
Introduction to Biocomputing
BioTech Bioinformatics Introduction
Online Lectures on Bioinformatics
Bioinformatics Lectures 2000
An On-Line Biology Book
Why are proteins important and what are they
The Biology Project
BMI-203 Biocomputing Algorithms
A short introduction to Biocomputing
Bioinformatics.Org Bioinformatics FAQ
Structural Bioinformatics - syllabus
Rat Race Applied Biocomputing

Cluster Software

Manta Fast Parallel Java
Jcluster - Java Parallel Environment
GAMMA Project (Fast Ethernet Comms as ldd)
FAI (Fully Automatic Installation) Home Page
g4u - Harddisk Image Cloning for PCs
HOWTO Clone Disk Images on Linux Booted from a Network
Installing GridEngine on an IBM 64 CPU Linux Compute Farm
SystemImager
Dolly
Titanium Home Page (a Java dialect)
Herdtools Basic Information
HINT - benchmarking
Informatics Benchmarking Toolkit (IBT)
smartmontools - system monitoring (storage)
Cluster Design Tool
SmokePing ABOUT SMOKEPING
Biolinux [ Home ]
Partimage homepage
Memory System Performance Characterization - ECT memperf
SPEC - Standard Performance Evaluation Corporation

Clusters

The Biowulf Cluster
Beowulf Article, HPCC insights
Supercomputers Track Human Genome
Matt Domsch's Linux for Dell page
ePrint archive - Distributed, Parallel, and Cluster Computing

Commercial

Scalable Informatics

Compiler stuff

Prof. David Skillicorn Faculty Profile

Complexity

Complexity of biological systems
Parallel Computers & Complex Systems
Emergent Behaviour in Complex Systems
CALRESCO - The Complexity and Artificial Life Research Concept for Self-Organizing Systems
Biological Complexity - Summary

Concurrent

Concurrent Programming Issues - White Paper Calsoft

cool graphics

evolutionzone.com

Debating

Debatabase - Debate Arguments!
LexisNexis - Newspaper Archive

Distributed

A primer on distributed computing.
Distributed Computing Introduction
DistributedProjects.com
Internet-based Distributed Computing Projects
PlanetLab
BOINC - Berkeley Open Inf Network Computing

Economics

History of Economic Thought

folk music

Knockadoon Folk Liturgy Course Homepage

GRID

gridcomputing.com
GRIDtoday

Journals

Trends in Cell Biology
The International Journal of Biochemistry & Cell Biology
Current Opinion in Cell Biology
Trends in Biochemical Sciences
Trends in Biotechnology
Trends in Genetics
Trends in Immunology
Future Generation Computer Systems
Crossings - Electronic Journal of Art and Technology
In Silico Biology
Parallel Computing Journal Issues
Journal of Systems Architecture
Bioinformatics
Parallel Processing Letters (PPL)

Links

MSC
CA
DCU
Google
NICB
DCU OPAC
DCU Library
RedBrick
Físchlár TV
CiteSeer
Science Direct
Scirus
Tutor Hours - CAPG
Web of Science

Parallel

ParaScope - list of sites
HPC Parallel Glossary
Parallel Computing Works
Parallel Computing Resources on the WWW
Journal of Parallel Computing
Introduction to the Principles of Parallel Computation
The Zen of Parallel Programming
Parallel Programming In C For the Transputer
HPF The High Performance Fortran Home Page
Introduction to Parallel Computing
Pooch Application

Parallel Algorithms

Lecture Notes - Parllel Algo for Sci Comp
Vas's M.Phil Chapter 7 taxonomy
Parallel Processing Concepts
Fundamentals of Distributed Memory Computing
Parallel Algorithms for Scientific Computing
Parallelization of Genetic Programming

Parallel Courses

UC Berkeley CS267 Home Page Spring 1996
Seminars and Training

People

Felix Rauch's Homepage

Programming

The Mozart Programming System
Simon Tatham's Home Page
Virtual Memory Allocation And Paging (GNU C)
The Hoard Multiprocessor Memory Allocator (malloc replacement)

Research Groups

Evolutionary & Swarm Design Group

Scientific Computing

Scientific Computing World
ScienceDirect
E-Book Computational Science
BioComputing Hypertext Coursebook
Deep computing for the life sciences

Visualisation

asci-asap screenshot gallery

A cryptographic compendium
An Atlas of Cyberspaces
Artificial Intelligence and Molecular Biology
arXiv.org e-Print archive
Bio-IT World Home Page - BIO IT technology trends & forecasts, technology selection, industry news & analysis, government polic
BSRF Books links
C Optimisation tutorial
Cellular Automata in Biology and Medicine
Colt
Complexity Theory Lecture Notes by Oded Goldreich
Curriculum Vitae for Gregory D. Collins
DATA group - Dublin
divide by zero - free fonts
Dynamics of Complex Systems PDF book
E-Cell Simulation Environment Version 3
Edward Tufte's Presentation Tips
EurekAlert! Public News List
Evolving Parallel Computation
EvoWeb
How to Keep Your Job
jwz.org
Links for Phd students
List of HPC courses, QUB
Lotus Artificial Life
MIT OpenCourseWare OCW Home
Musarium (Sep 11) - nice photo layout
Networking on the Network
Neural Machines
Online Lectures on Bioinformatics
Parasol Laboratory, Texas A&M
SAGEwire News for System Administrators
Science Box
SCXY Conference Series
Self-Organizing Systems FAQ for comp.theory.self-org-sys
Sequence searches
Strunk, William. 1918. The Elements of Style.
Text Processing using LaTeX
The Science of Scientific Writing
The Trend Cellular Automata Programming Environment
Tierra Photoessay
Tim Tyler's Home Page
Titanium Home Page
Who wrote the book of life
CMSC 838T High Performance Computing & Bioinformatics
The Members Archives
IT2 expo History of Supercomputing exhibit
The Open Problems Project
College Physics for Students of Biology and Chemistry
Elementary Computer Mathematics
Complexity Digest
Dublin City's congestion map
T E X T F I L E S
The Biocatalog
Online Bioinformatics Resources
Scirus - for scientific information
PSSC Labs - The Beowulf Builders
HPCC Benchmarks
PHP Installation - Manual
What is Mac OS X
Don P. Mitchell's Home Page
Micropolitan Museum
Modelling & Scientific Computing @ School of Computing, DCU, Ireland
CCL -- Computational Chemistry Archives
SPSS for Windows Getting Started
Are You Living in a Computer Simulation
Biomart Project
www.gaeltalk.net
Conversion Calculator Byte Kilobyte Megabyte Gigabyte Terabyte Petabyte Exabyte
Annual Review of Genomics and Human Genetics - 2(1)235 - Abstract
BioWall
Strange Attractors and TCP-IP Sequence Number Analysis
The Linux Virtual Server Project - Linux Server Cluster
Java Puzzlers
Rosetta Stone for Unix
Write your own OS
Feature High Memory In The Linux Kernel

Old stuff:

A list apart
The Art of Assembly programming
Awk tutorial
Brian Kernighan interview
BSD History
BSD Firewalls
Introduction to OO C/C++
C++ Language tutorial
C++ links
C Programming - Unix system calls and routines in C
Rob Pike - C programming notes
Cluster example
Close Program list reference
Cool Homepages
DNS Resources directory
Eterm
Feck dot files
FreeBSD zine
FreeBSD book
FreeBSD Security HOWTO
Future of X86 performance
HEAnet faults
HEAnet
HEAnet graphs
HtDig
HTML Help
Case for IPv6
Introduction to x86 assembly
Intel instruction set
Javascript
Linear Algebra
Links web browser
Linux & S/390
Linux Assembly
The evils of LD_LIBRARY_PATH
Mutt help
Mutt
Microsoft Undocumented features
Network Administrator's guide
Operating Systems through time
Prolog
Paper on make
RAID explanation
Security Portal
Sed FAQ
Slrn setup
Slrn
Solaris Central
Solaris swap space
Solaris tunables
SSI
Top 10 ways to get screwed by the C programming language
Unix history
Unix & Oracle
Usable web
UseIt.com
Web standards
Web design @ glassdog
Web Resource
Web techniques
Lighthouse design
Web monkey
x86 Assembly language FAQ - General part 2/3


Last modified: Saturday, 16-Jul-2005 11:44:59 IST